VSC User Documentation - Gent (Linux)
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VSC User Documentation - Gent (Linux)
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Welcome
Introduction to HPC
Getting Started
Getting an HPC Account
Connecting to the HPC infrastructure
Running batch jobs
Running interactive jobs
Running jobs with input/output data
Available software
Multi core jobs/Parallel Computing
Using the HPC-UGent web portal
Interactive and debug cluster
XDMoD portal
Troubleshooting
HPC Policies
Advanced topics
Advanced topics
Torque frontend via jobcli
Fine-tuning Job Specifications
Multi-job submission
Compiling and testing your software on the HPC
Program examples
Job script examples
Best Practices
Graphical applications with VNC
Graphical applications with X2Go
GPU clusters
Cron scripts
Teaching and training
Linux tutorial
Linux tutorial
Introduction
Getting Started
Navigating
Manipulating files and directories
Uploading files
Beyond the basics
Common pitfalls
More on the HPC infrastructure
Software-specific Best Practices
Software-specific Best Practices
AlphaFold
Apptainer/Singularity
EasyBuild
Jupyter notebook
MATLAB
mympirun
OpenFOAM
Python
Python virtual environments
FAQ
FAQ
Frequently Asked Questions
Appendices
Appendices
Appendix A - HPC Quick Reference Guide
Appendix B - TORQUE options
Appendix C - Useful Linux Commands
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